Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891949.1_cds_XP_016446856.1_41670
CDS Infomation

[gene=LOC107771908] [db_xref=GeneID:107771908] [protein=transcription factor RAX3] [protein_id=XP_016446856.1] [location=complement(join(18198..18487,18626..19538,20116..20439))] [gbkey=CDS]
Sequence

ATGGCCCTAGACGATAGAGGAATGAAGGCGTCGTCAGGAGGAGGAAGAAACGGAGGAACA
AGCAGGCAAGCGCTTAAGAAAGGGCCATGGACAGCAACAGAAGACGCGATTTTAATGGAG
TATGTGAAGAAACATGGAGAAGGTAATTGGAATGCTGTTCAAAGGAATTCAGGATTGATG
AGATGTGGTAAAAGTTGTAGGTTAAGATGGGCTAATCATCTTAGACCTAATCTTAAGAAA
GGTGCTTTTTCTCCTGAGGAAGAAAGGATTATTATTGAGCTTCATGCTAAACTTGGCAAC
AAATGGGCTCGCATGGCTGCTCAGTTACCTGGAAGAACAGACAATGAGATCAAGAATTAC
TGGAACACAAGGCTAAAGAGAAGACAAAGAGCTGGTTTGCCTATATACCCTCAAGAATTA
CAACCACAAAACCAACAAGAAAACAATCAACACCAAAACCTTCTTTCTTCACCATATGAT
CCCAAAAGGGCAACTTATAATAATAACAATCCTCCCTCTTTTTCCCTTTTGGATATCTTC
AATCCTTCAACCATGAAACCTTCTATTACTCAACAATTCCCTCTTAATAATAACAACATT
TTTCACGATCCTCCTAAAGGCATTTCCTTGACATTGCCATCGTCTATAAGGAATTCGCAA
TTTTCTTCACTATCTAAATCTGTGCCAAATAACAACTTTGGTCACGGCTTGTCCAATTCA
ATGCCAATGCCATCATTTCAAAATAACTATCCAAGTTTTAATAACTTCACAACAAGGCCT
TTTACGGGGAATATTCATTCGAATCCAAATGAATTAATCTCTGGTATAGGAGGTATTAAT
AATATTAATTATCCCTCAGGACAATCATCTATCCCTGTAACTGCATCATCATCTGAGAAT
ACAGGCAGTGATTTTGGTTCAAGTGATGCTAATAATTATGCAAATGTTGCTGGATTATCG
CGAGGAAATAGTGGATTATTGGAAGATTTATTGGAGGAGTCTCAGACTTTGACTACTCGC
ACTGTCAAGATAGAAGATCAGAATAATAATCTTGATTTAAAGGAAGAAGAAGCTGATTAT
AAAGGGAAATCATTGTGGGAAGATTATGGATTAGTGGAAGAGGAAGGAGAAGAAGCTATT
TTAACTGAAGAATCCGTTTACAGCTTTGCTCATGGTGTTGATGTCACCTTAAATAGTAAC
TCTGAAAGCTCCAGCCCTGATCCCAAATTATCTTCAGGGATATTGAAGAAGGAAGTTTCA
TTACAGGGAATTAATCAAGTGGATGACGATATAATGTGCCTTCTTGATAATTTTCCGTTA
GCTGTACCAGTTCCTGATTGGTATGACGAAAGGGAAGACAAAAATAATTCAAATGGACAA
TTGTCAAATGTGACAAATGGTGATCACAAAGCTGAAAATCAGGCTGAAGATTCTAATAAG
TCACAAGTTGTGACAAATTCAGGGCCTAGGAACCATGATTGGGAACTTGGAGGATGTTGC
TGGAATAACATGCCTTCTTTTTGCTAG

Peptide Sequence

PEP ID

XP_016446856.1
PEP Infomation

PREDICTED: transcription factor RAX3 [Nicotiana tabacum]
Sequence

MALDDRGMKASSGGGRNGGTSRQALKKGPWTATEDAILMEYVKKHGEGNWNAVQRNSGLM
RCGKSCRLRWANHLRPNLKKGAFSPEEERIIIELHAKLGNKWARMAAQLPGRTDNEIKNY
WNTRLKRRQRAGLPIYPQELQPQNQQENNQHQNLLSSPYDPKRATYNNNNPPSFSLLDIF
NPSTMKPSITQQFPLNNNNIFHDPPKGISLTLPSSIRNSQFSSLSKSVPNNNFGHGLSNS
MPMPSFQNNYPSFNNFTTRPFTGNIHSNPNELISGIGGINNINYPSGQSSIPVTASSSEN
TGSDFGSSDANNYANVAGLSRGNSGLLEDLLEESQTLTTRTVKIEDQNNNLDLKEEEADY
KGKSLWEDYGLVEEEGEEAILTEESVYSFAHGVDVTLNSNSESSSPDPKLSSGILKKEVS
LQGINQVDDDIMCLLDNFPLAVPVPDWYDEREDKNNSNGQLSNVTNGDHKAENQAEDSNK
SQVVTNSGPRNHDWELGGCCWNNMPSFC

Transcript Sequence

Gene sequence data has not been registered.